Volume 112, Issue 5

November 2025

Browse Issues:

HIGHLIGHTED ARTICLES

EDITORS' SUGGESTION

Inferring tree structure with hidden traps from first-passage times

Fabian H. Kreten, Ludger Santen, and Reza Shaebani

Phys. Rev. E 112, 054306 (2025) - Published 10 November, 2025

Inferring tree structure is a problem of practical relevance across diverse domains, from biological transport networks to engineered systems. The results presented here lend themselves to potential applications in noninvasive structural inference, particularly in scenarios where direct observation is challenging.

#WellStructured #ClearMotivation

EDITORS' SUGGESTION

Flagellar dynamics and entanglement of $E . c o l i$ bacteria in polymeric hydrogel

Diksha Shrestha, Deborah Okyere, Sam Mortenson, Jingyi Chen, and Yong Wang

Phys. Rev. E 112, 054404 (2025) - Published 6 November, 2025

The authors investigate how behavior and dynamics of bacterial flagella are affected by complex environments, an area that has been largely unexplored. They visualize dynamics of fluorescently labeled flagellar filaments of $E$ . $c o l i$ bacteria in a hydrogel and find three distinct types of flagellar motions.

#BiophysicsSpotlight #TheoryExperiment #ElegantVisuals

EDITORS' SUGGESTION

Effect of stereochemical constraints on the structural properties of folded proteins

Jack A. Logan, Jacob Sumner, Alex T. Grigas, Mark D. Shattuck, and Corey S. O'Hern

Phys. Rev. E 112, 054405 (2025) - Published 6 November, 2025

This study compares a series of coarse-grained protein models of increasing complexity to identify the simplest model that reproduces key structural properties of protein cores. The results show that accurate modeling of protein cores requires capturing the correct size and anisotropic shape of side chains.

#BiophysicsSpotlight #TheoryExperiment #WellStructured

EDITORS' SUGGESTION

Relativistic multistage resonant and trailing-field acceleration induced by large-amplitude Alfvén waves in a strong magnetic field

S. Isayama, S. Matsukiyo, T. Sano, and S. H. Chen

Phys. Rev. E 112, 055201 (2025) - Published 4 November, 2025

This study addresses particle acceleration up to relativistic energies via a nonlinear evolution of a large-amplitude Alfvén wave. A multistage process is observed in numerical particle-in-cell simulations. The results provide insights into coherent wave-particle interactions in collisionless plasmas with potential implications for the understanding of high-energy cosmic-ray generation in astrophysical environments such as pulsar magnetospheres, accretion disks, and relativistic jets.

#AdvancingField

EDITORS' SUGGESTION

Nonideal stability analysis of differentially rotating plasmas with global curvature effects

Alexander Haywood and Fatima Ebrahimi

Phys. Rev. E 112, 055207 (2025) - Published 17 November, 2025

Understanding the behavior of differentially rotating plasmas is important for the study of turbulence and transport in systems such as accretion disks and stellar interiors, as well as in laboratory experiments. The authors use various techniques to analyze the stability of these systems, in particular focusing on the competition between the magneto-rotational instability and the magneto-curvature instability.

#AdvancingField #ClearMotivation

EDITORS' SUGGESTION

Geometric dynamics of signal propagation predict trainability of transformers

Aditya Cowsik, Tamra Nebabu, Xiaoliang Qi, and Surya Ganguli

Phys. Rev. E 112, 055301 (2025) - Published 3 November, 2025

In the context of machine learning, a novel permutation-symmetric ansatz allows the authors to extend earlier results from the multilayer perceptron to a transformer architecture. The study of the correlations inside the model and between the model weights and data should lead to a deeper understanding of the structure of trained transformers.

#MachineLearningSpotlight #WellStructured #AdvancingField

EDITORS' SUGGESTION

Particle-scale origin of quadrupolar nonaffine displacement fields in granular solids

Evan P. Willmarth, Weiwei Jin, Dong Wang, Amit Datye, Udo D. Schwarz, Mark D. Shattuck, and Corey S. O'Hern

Phys. Rev. E 112, 055402 (2025) - Published 4 November, 2025

This manuscript investigates the mechanical response, i.e. non-affine displacement, of jammed disk packings subject to athermal, quasistatic shear. The authors identify that isolated effective quadrupoles emerge upon shearing and that these are correlated with the breaking of interparticle contacts. They interpret the numerical results in terms of Eshelby-like triangle defects.

#SoftMatterSpotlight #AdvancingField

EDITORS' SUGGESTION

Response of a magnetic particle to rotating magnetic field in viscoelastic fluid

Han Gao, Zhiyuan Zhao, Masao Doi, and Ye Xu

Phys. Rev. E 112, 055417 (2025) - Published 17 November, 2025

The authors studied the rotational motion of isolated ferromagnetic spheres that were suspended in viscoelastic fluids of various compositions and driven by rotating magnetic fields. The experiments and theoretical analysis show that the dynamics in polymer solutions resemble those seen in Newtonian fluids but with a smaller critical frequency, which decreases with increasing polymer concentration.

#TheoryExperiment #SoftMatterSpotlight

EDITORS' SUGGESTION

LETTER

Transfer entropy for finite data

Alec Kirkley

Phys. Rev. E 112, L052304 (2025) - Published 24 November, 2025

The author provides a principled solution to correct the widely used transfer entropy measure for finite data and applies their measure to a range of real and synthetic datasets. The work shows that this corrected measure may change conclusions for some applications.

#AdvancingField #ClearMotivation

LETTERS

Statistical Physics

LETTER

Breakdown of hydrodynamics in a one-dimensional cold gas

Taras Holovatch, Yuri Kozitsky, Krzysztof Pilorz, and Yurij Holovatch

Phys. Rev. E 112, L052101 (2025) - Published 12 November, 2025

LETTER

Large orders and strong-coupling limit in functional renormalization

Mikhail N. Semeikin and Kay Jörg Wiese

Phys. Rev. E 112, L052102 (2025) - Published 12 November, 2025

LETTER

Effects of symmetry on coupled rotary molecular motors

Sara Iranbakhsh and David A. Sivak

Phys. Rev. E 112, L052103 (2025) - Published 26 November, 2025

Nonlinear Dynamics and Chaos

LETTER

Size of the sync basin resolved

Pablo Groisman, Cecilia De Vita, Julián Fernández Bonder, and Yuanzhao Zhang

Phys. Rev. E 112, L052201 (2025) - Published 3 November, 2025

LETTER

Heterogeneity induces cyclops states in Kuramoto networks with higher-mode coupling

Maxim I. Bolotov, Lev A. Smirnov, Vyacheslav O. Munyayev, Grigory V. Osipov, and Igor Belykh

Phys. Rev. E 112, L052202 (2025) - Published 14 November, 2025

Networks and Complex Systems

LETTER

Mean-field game approach to epidemic propagation on networks

Louis Bremaud, Olivier Giraud, and Denis Ullmo

Phys. Rev. E 112, L052301 (2025) - Published 3 November, 2025

LETTER

Participant-invariant, evolving patterns of influence in dynamic networks

Shaojie Min (闵少杰), Jiaxing Shang (尚家兴), Ji Liu (刘骥), and Yang Chen (陈阳)

Phys. Rev. E 112, L052302 (2025) - Published 4 November, 2025

LETTER

Mitigating cascades in coevolving networks with targeted rewiring

Karan Singh, Kabilan Thirumurugan, V. K. Chandrasekar, and D. V. Senthilkumar

Phys. Rev. E 112, L052303 (2025) - Published 14 November, 2025

EDITORS' SUGGESTION

LETTER

Transfer entropy for finite data

Alec Kirkley

Phys. Rev. E 112, L052304 (2025) - Published 24 November, 2025

#AdvancingField #ClearMotivation

Plasma Physics

LETTER

Non-Maxwellianity of ion velocity distributions in the Earth's magnetosheath

Louis Richard, Sergio Servidio, Ida Svenningsson, Anton V. Artemyev, Kristopher G. Klein, Emiliya Yordanova, Alexandros Chasapis, Oreste Pezzi, and Yuri V. Khotyaintsev

Phys. Rev. E 112, L053201 (2025) - Published 3 November, 2025

LETTER

Nonlocal current-driven heat flow in ideal plasmas

Nicholas Mitchell, David Chapman, and Grigory Kagan

Phys. Rev. E 112, L053202 (2025) - Published 24 November, 2025

LETTER

Observation of kinetic mix enhancement in thin-shell OMEGA implosions

B. L. Reichelt, M. Gatu Johnson, J. H. Kunimune, W. Taitano, P. J. Adrian, S. E. Anderson, L. Chacón, M. Cufari, T. E. Evans, C. J. Forrest, B. M. Haines, T. M. Johnson, N. V. Kabadi, B. D. Keenan, R. D. Petrasso, I. Ruiz, C. Shuldberg, J. A. Frenje, and C. K. Li

Phys. Rev. E 112, L053203 (2025) - Published 24 November, 2025

Mechanics, Interfaces, and Films

LETTER

Crossover in growth law in the vapor-liquid phase separation inside complex porous media

Preethi M and Bhaskar Sen Gupta

Phys. Rev. E 112, L053501 (2025) - Published 13 November, 2025

ARTICLES

Statistical Physics

Linear-inverse-modeling approach to estimating Liang-Kleeman information flow in a cyclostationary process under memoryless and persistent noise

Justin Lien, Hiroyasu Ando, Yong-Yub Kim, and Tomoki Tozuka

Phys. Rev. E 112, 054101 (2025) - Published 3 November, 2025

Quantum effects in rotationally invariant spin glass models

Yoshinori Hara and Yoshiyuki Kabashima

Phys. Rev. E 112, 054102 (2025) - Published 3 November, 2025

Activity-driven demixing and sustained temperature gradients in inertial active-passive mixtures

Ze-long Gao, Jia-jian Li, and Bao-quan Ai

Phys. Rev. E 112, 054103 (2025) - Published 3 November, 2025

Simple traffic model as a space-time clustering phenomenon

Aryaman Jha, Kurt Wiesenfeld, Garyoung Lee, and Jorge Laval

Phys. Rev. E 112, 054104 (2025) - Published 4 November, 2025

Optimal control strategy for collisional Brownian engines

Gustavo A. L. Forão

Phys. Rev. E 112, 054105 (2025) - Published 4 November, 2025

Energetics of self-organization in a dissipative two-qubit system driven by single-photon pulses

Thiago Ganascini, Wendel Lopes da Silva, and Daniel Valente

Phys. Rev. E 112, 054106 (2025) - Published 6 November, 2025

Critical behavior analysis of pure dipolar triangular lattice via equilibrium and nonequilibrium Monte Carlo simulations

S. Ismailzadeh and M. D. Niry

Phys. Rev. E 112, 054107 (2025) - Published 7 November, 2025

Dynamical equation for the Lorenz curve: Dynamics of incomplete moments of probability distributions arising from Fokker-Planck equations

David W. Cohen, Merek Johnson, and Bruce M. Boghosian

Phys. Rev. E 112, 054108 (2025) - Published 7 November, 2025

Local entropy production rate of run-and-tumble particles

Matteo Paoluzzi, Andrea Puglisi, and Luca Angelani

Phys. Rev. E 112, 054109 (2025) - Published 7 November, 2025

Nonreciprocal antialigning active mixtures: Deriving the exact Boltzmann collision operator

Jakob Mihatsch and Thomas Ihle

Phys. Rev. E 112, 054110 (2025) - Published 10 November, 2025

Memory engine: Self-organized coherence from internal feedback

Aranyak Sarkar

Phys. Rev. E 112, 054111 (2025) - Published 10 November, 2025

Anomalous collective diffusion in two-dimensional active particle systems

Weirong Zhong

Phys. Rev. E 112, 054112 (2025) - Published 10 November, 2025

From equilibrium to nonequilibrium statistical mechanics of liquids

O. Joaquín-Jaime, R. Peredo-Ortiz, M. Medina-Noyola, and L. F. Elizondo-Aguilera

Phys. Rev. E 112, 054113 (2025) - Published 10 November, 2025

Stochastic closed Frank model in two dimensions: Chiral symmetry breaking driven by diffusive control over bounded surfaces

José Cândido de Souza Filho and Alejandro López-Castillo

Phys. Rev. E 112, 054114 (2025) - Published 12 November, 2025

Run-and-tumble dynamics with nonreciprocal transitions among three velocity states

Julio C. R. Romo-Cruz and Francisco J. Sevilla

Phys. Rev. E 112, 054115 (2025) - Published 12 November, 2025

Long-range interacting particles on a helix: A statistical and correlation analysis of equilibrium configurations

J. M. Dörre, F. K. Diakonos, and P. Schmelcher

Phys. Rev. E 112, 054116 (2025) - Published 12 November, 2025

Non-Markovian route to coherence in heterogeneous diffusive systems

Aranyak Sarkar

Phys. Rev. E 112, 054117 (2025) - Published 12 November, 2025

Self-diffusion in confined systems

M. Mayo, M. I. García de Soria, P. Maynar, and J. J. Brey

Phys. Rev. E 112, 054118 (2025) - Published 12 November, 2025

Inertial and confined dynamics of a constant-speed active particle in three dimensions

Glend Ford B. Rodriguez, Marissa T. Rangaig, and Norodin A. Rangaig

Phys. Rev. E 112, 054119 (2025) - Published 12 November, 2025

Entropy production and statistical relaxation of dipolar bosons and fermions in interaction quench dynamics

Barnali Chakrabarti, N. D. Chavda, and F. V. Prudente

Phys. Rev. E 112, 054120 (2025) - Published 12 November, 2025

Dimensionality-induced dynamical phase transition in the large deviation of local time density for Brownian motion

Ruofei Yan and Hanshuang Chen

Phys. Rev. E 112, 054121 (2025) - Published 12 November, 2025

Deep learning of thermodynamic laws from microscopic dynamics

Hiroto Kuroyanagi and Tatsuro Yuge

Phys. Rev. E 112, 054122 (2025) - Published 13 November, 2025

Quantifying irreversibility via Bayesian subjectivity for classical and quantum linear maps

Lizhuo Liu and Clive Cenxin Aw

Phys. Rev. E 112, 054123 (2025) - Published 13 November, 2025

Thermodynamic geometric control of active matter

Yating Wang, Enmai Lei, Yu-Han Ma, Z. C. Tu, and Geng Li

Phys. Rev. E 112, 054124 (2025) - Published 14 November, 2025

Hamiltonian formulation for the motion of an active spheroidal particle suspended in laminar straight duct flow

Brendan Harding, Rahil N. Valani, and Yvonne M. Stokes

Phys. Rev. E 112, 054125 (2025) - Published 17 November, 2025

Compressed self-avoiding walks in two and three dimensions

C. J. Bradly, N. R. Beaton, and A. L. Owczarek

Phys. Rev. E 112, 054126 (2025) - Published 17 November, 2025

Constraint correlation functions of the one-dimensional Ising model in the scaling limit

Ivan Balog and Adam Rançon

Phys. Rev. E 112, 054127 (2025) - Published 17 November, 2025

Learning the Renyi entropy of multiple disjoint intervals in transverse-field quantum Ising models with a restricted Boltzmann machine

Han-Qing Shi and Hai-Qing Zhang

Phys. Rev. E 112, 054128 (2025) - Published 17 November, 2025

Position-momenta uncertainties in classical systems

Dipesh K. Singh and P. K. Mohanty

Phys. Rev. E 112, 054129 (2025) - Published 17 November, 2025

Unified approach to power-efficiency trade-off relations of generic thermal machines

Yu-Han Ma and Cong Fu

Phys. Rev. E 112, 054130 (2025) - Published 18 November, 2025

Local and global heat capacities of confined Bose gases: The impact of quantum migration

Altug Sisman and Jonas Fransson

Phys. Rev. E 112, 054131 (2025) - Published 18 November, 2025

Intermittent localization and fast spatial learning by non-Markov random walks with decaying memory

Paulina R. Martín-Cornejo and Denis Boyer

Phys. Rev. E 112, 054132 (2025) - Published 18 November, 2025

Fractal depth-first search paths in statistical physics models

Qiyuan Shi, Youjin Deng, and Ming Li

Phys. Rev. E 112, 054133 (2025) - Published 19 November, 2025

Memory-aware feedback enhances power in active information engines

Sehoon Bahng, Jae Sung Lee, and Cheol-Min Ghim

Phys. Rev. E 112, 054134 (2025) - Published 20 November, 2025

Zero-temperature dynamics of Ising systems on hypercubes

R. Chen, J. Machta, C. M. Newman, and D. L. Stein

Phys. Rev. E 112, 054135 (2025) - Published 20 November, 2025

Interaction-free ergodicity-breaking driven by temporally hyperuniform noise

Harukuni Ikeda

Phys. Rev. E 112, 054136 (2025) - Published 20 November, 2025

Macroscopic theory of multipartite correlations in permutation-invariant open quantum systems

Krzysztof Ptaszyński, Maciej Chudak, and Massimiliano Esposito

Phys. Rev. E 112, 054137 (2025) - Published 21 November, 2025

Field theory of birhythmicity

Sergei Shmakov and Peter B. Littlewood

Phys. Rev. E 112, 054138 (2025) - Published 21 November, 2025

Analogies between the virial theorem and the Price equation

Catherine Felce, Steinunn Liorsdóttir, and Lior Pachter

Phys. Rev. E 112, 054139 (2025) - Published 21 November, 2025

Thermodynamic entropic uncertainty relation

Yoshihiko Hasegawa and Tomohiro Nishiyama

Phys. Rev. E 112, 054140 (2025) - Published 21 November, 2025

Fundamental measure theory for predicting many-body correlation functions

Ilian Pihlajamaa, Teunike A. van de Pol, and Liesbeth M. C. Janssen

Phys. Rev. E 112, 054141 (2025) - Published 25 November, 2025

Optimal quantum transport on a ring via locally monitored chiral quantum walks

Sara Finocchiaro, Giovanni O. Luilli, Giuliano Benenti, Matteo G. A. Paris, and Luca Razzoli

Phys. Rev. E 112, 054142 (2025) - Published 26 November, 2025

Nonlinear Dynamics and Chaos

Effect of diversity distribution symmetry on global oscillations of networks of excitable units

Stefano Scialla, Marco Patriarca, Els Heinsalu, Marius E. Yamakou, and Julyan H. E. Cartwright

Phys. Rev. E 112, 054201 (2025) - Published 3 November, 2025

Characterizing the mixed eigenstates in kicked top model through the out-of-time-order correlator

Qian Wang and Marko Robnik

Phys. Rev. E 112, 054202 (2025) - Published 4 November, 2025

Anatomy of information scrambling and decoherence in the integrable Sachdev-Ye-Kitaev model

Antonio M. García-García, Chang Liu (刘畅), Lucas Sá, Jacobus J. M. Verbaarschot, and Jie-ping Zheng (郑杰平)

Phys. Rev. E 112, 054203 (2025) - Published 4 November, 2025

Geometric perspective of linear stability of q-states in finite Kuramoto networks on circulant graphs

Yashee Sinha, Priya B. Jain, Antonio Mihara, Rene O. Medrano-T, Ján Mináč, Lyle E. Muller, and Roberto C. Budzinski

Phys. Rev. E 112, 054204 (2025) - Published 4 November, 2025

Fate of traveling waves at the boundary of quantum droplets

Angel Paredes, Jose Guerra-Carmenate, and Humberto Michinel

Phys. Rev. E 112, 054205 (2025) - Published 4 November, 2025

Quantization of nonlinear non-Hamiltonian systems

Andy Chia, Wai-Keong Mok, Leong-Chuan Kwek, and Changsuk Noh

Phys. Rev. E 112, 054206 (2025) - Published 5 November, 2025

Learning transitions to extreme events using reservoir computing

Ajit Mahata, S. Leo Kingston, Subrata Ghosh, Syamal K. Dana, and Tomasz Kapitaniak

Phys. Rev. E 112, 054207 (2025) - Published 5 November, 2025

Synaptic plasticity alters the nature of the chaos transition in neural networks

Wenkang Du and Haiping Huang

Phys. Rev. E 112, 054208 (2025) - Published 7 November, 2025

Influence of coherent coupling between counterpropagating waves on spontaneous symmetry breaking and complex oscillations in Kerr microcavities

Svyatoslav S. Kulpin, Alexey V. Andrianov, and Elena A. Anashkina

Phys. Rev. E 112, 054209 (2025) - Published 7 November, 2025

Nonlinearity test for complex time series without surrogates

Pedro Carpena, Pedro A. Bernaola-Galván, Concepción Carretero-Campos, and Ana V. Coronado

Phys. Rev. E 112, 054210 (2025) - Published 7 November, 2025

Bifurcation scenarios for chirped mode locking in a semiconductor laser

G. S. Zhuravlev, A. V. Kovalev, A. E. Romanov, and E. A. Viktorov

Phys. Rev. E 112, 054211 (2025) - Published 7 November, 2025

Shearless barriers in the conservative Ikeda map

Rodrigo Simile Baroni, Ricardo Egydio de Carvalho, José Danilo Szezech Junior, and Iberê Luiz Caldas

Phys. Rev. E 112, 054212 (2025) - Published 7 November, 2025

Symmetry breaking in a metapopulation model with fitness-dependent dispersal

V. Vikram, V. K. Chandrasekar, and R. Gopal

Phys. Rev. E 112, 054213 (2025) - Published 10 November, 2025

Fundamental performance bounds on reservoir computing

Daoyuan Qian and Ila Fiete

Phys. Rev. E 112, 054214 (2025) - Published 10 November, 2025

Semiclassical study of diagonal and off-diagonal functions in the eigenstate thermalization hypothesis

Xiao Wang (王晓) and Wen-ge Wang (王文阁)

Phys. Rev. E 112, 054215 (2025) - Published 12 November, 2025

Synchronization of identical oscillators on a sphere: Exact results with external forces and higher-order interactions

Guilherme S. Costa, Marcel Novaes, Ricardo Fariello, and Marcus A. M. de Aguiar

Phys. Rev. E 112, 054216 (2025) - Published 13 November, 2025

Dynamics of pulsating swarmalators on a ring

Samali Ghosh, Kevin O'Keeffe, Gourab Kumar Sar, and Dibakar Ghosh

Phys. Rev. E 112, 054217 (2025) - Published 13 November, 2025

Sustaining the chaotic dynamics of the Kuramoto model by adaptable reservoir computer

Haibo Luo, Mengru Wang, Yao Du, Huawei Fan, Yizhen Yu, and Xingang Wang

Phys. Rev. E 112, 054218 (2025) - Published 17 November, 2025

Controlling quantum chaos via Parrondo strategies on noisy intermediate-scale quantum hardware

Aditi Rath, Dinesh Kumar Panda, and Colin Benjamin

Phys. Rev. E 112, 054219 (2025) - Published 18 November, 2025

Predicting synchronization and oscillation death with parallel reservoir computing

Swati Chauhan, Umesh Kumar Verma, Swarnendu Mandal, and Manish Dev Shrimali

Phys. Rev. E 112, 054220 (2025) - Published 21 November, 2025

Dynamics of coupled $D$ -dimensional Stuart-Landau oscillators

Pragjyotish Bhuyan Gogoi, Awadhesh Prasad, Aryan Patel, Ram Ramaswamy, and Debashis Ghoshal

Phys. Rev. E 112, 054221 (2025) - Published 21 November, 2025

Coherence and transients in nonlocally coupled dissipative kicked rotors

Jin Yan

Phys. Rev. E 112, 054222 (2025) - Published 24 November, 2025

Analysis of the chaotic itinerancy phenomenon using entropy and clustering

Nikodem Mierski and Paweł Pilarczyk

Phys. Rev. E 112, 054223 (2025) - Published 24 November, 2025

Energy transfer mediated by Holstein-type interactions in two space dimensions

Sergio Reza-Mejía and Luis A. Cisneros-Ake

Phys. Rev. E 112, 054224 (2025) - Published 24 November, 2025

Singular-value-decomposition-based causal emergence for Gaussian iterative systems

Kaiwei Liu, Linli Pan, Zhipeng Wang, Mingzhe Yang, Bing Yuan, and Jiang Zhang

Phys. Rev. E 112, 054225 (2025) - Published 24 November, 2025

Utilizing coupled reservoir computing to predict network dynamics and structure

Zhongchuang Zhang and Shuai Wang

Phys. Rev. E 112, 054226 (2025) - Published 25 November, 2025

Networks and Complex Systems

Parameter estimation in interacting particle systems on dynamic random networks

Simone Baldassarri and Jiesen Wang

Phys. Rev. E 112, 054301 (2025) - Published 3 November, 2025

Higher-order shortest paths in hypergraphs

Berné L. Nortier, Simon Dobson, and Federico Battiston

Phys. Rev. E 112, 054302 (2025) - Published 5 November, 2025

Predicting steady-state behavior in complex networks with graph neural networks

Priodyuti Pradhan and Amit Reza

Phys. Rev. E 112, 054303 (2025) - Published 6 November, 2025

Emergent inflation-deflation cycles from minimalistic wage dynamics

Tobias H. B. Holm and Kim Sneppen

Phys. Rev. E 112, 054304 (2025) - Published 7 November, 2025

Emerging activity temporal hypergraph: A model for generating realistic time-varying hypergraphs

Marco Mancastroppa, Giulia Cencetti, and Alain Barrat

Phys. Rev. E 112, 054305 (2025) - Published 7 November, 2025

EDITORS' SUGGESTION

Inferring tree structure with hidden traps from first-passage times

Fabian H. Kreten, Ludger Santen, and Reza Shaebani

Phys. Rev. E 112, 054306 (2025) - Published 10 November, 2025

#WellStructured #ClearMotivation

Prejudice-driven spite: A discontinuous phase transition in the ultimatum game

Arunava Patra, C. F. Sagar Zephania, and Sagar Chakraborty

Phys. Rev. E 112, 054307 (2025) - Published 10 November, 2025

Epidemic dynamics with non-Markovian infection processes in metapopulation networks

Yuan-Hao Xu, Lele Zhang, Wei Zhu, and Mao-Bin Hu

Phys. Rev. E 112, 054308 (2025) - Published 12 November, 2025

Evolution of cooperation in a dual-mode mixture of conditional cooperators

Chenyang Zhao, Xinshi Feng, Guozhong Zheng, Weiran Cai, Jiqiang Zhang, and Li Chen

Phys. Rev. E 112, 054309 (2025) - Published 12 November, 2025

Random hyperbolic graphs with arbitrary mesoscale structures

Stefano Guarino, Enrico Mastrostefano, and Davide Torre

Phys. Rev. E 112, 054310 (2025) - Published 12 November, 2025

Roughening of information landscape with asymmetric social contagion process on complex networks

Haechan Seo and Soon-Hyung Yook

Phys. Rev. E 112, 054311 (2025) - Published 13 November, 2025

Predicting cover-time distribution of noncompact random walks

Jia-Qi Dong, Chang Liu, Wen-Hui Han, and Liang Huang

Phys. Rev. E 112, 054312 (2025) - Published 13 November, 2025

Spin resonance without a spin: A microwave analog

Tobias Hofmann, Finn Schmidt, Hans-Jürgen Stöckmann, and Ulrich Kuhl

Phys. Rev. E 112, 054313 (2025) - Published 13 November, 2025

Efficient detour-aware dynamic routing based on local traffic load in urban road networks

Jie Chen, Yantao Zhang, Xin Hong, Shengxian Wang, Maobin Hu, and Fulong Chen

Phys. Rev. E 112, 054314 (2025) - Published 14 November, 2025

Discontinuous percolation via suppression of neighboring clusters in a network

Young Sul Cho

Phys. Rev. E 112, 054315 (2025) - Published 18 November, 2025

When heterogeneity drives hysteresis: Anticonformity in the multistate $q$ -voter model on networks

Arkadiusz Lipiecki and Katarzyna Sznajd-Weron

Phys. Rev. E 112, 054316 (2025) - Published 19 November, 2025

Bounded-confidence models of opinion dynamics with neighborhood effects

Sanjukta Krishnagopal and Mason A. Porter

Phys. Rev. E 112, 054317 (2025) - Published 19 November, 2025

Eigenvalue distribution of empirical correlation matrices for multiscale complex systems and application to financial data

Luan M. T. de Moraes, Antônio M. S. Macêdo, Giovani L. Vasconcelos, and Raydonal Ospina

Phys. Rev. E 112, 054318 (2025) - Published 26 November, 2025

Biological Physics

Modeling bulk mechanical effects in a planar cellular monolayer

Natasha Cowley, Sarah Woolner, and Oliver E. Jensen

Phys. Rev. E 112, 054401 (2025) - Published 3 November, 2025

Thermodynamic selection: The role of entropy waste elimination in evolution

Enno Wein, Arik Avagyan, and David B. Saakian

Phys. Rev. E 112, 054402 (2025) - Published 3 November, 2025

Anomalous proteinaceous shells with octagonal local order

Sergei B. Rochal, Aleksey S. Roshal, Olga V. Konevtsova, and Rudolf Podgornik

Phys. Rev. E 112, 054403 (2025) - Published 3 November, 2025

EDITORS' SUGGESTION

Flagellar dynamics and entanglement of $E . c o l i$ bacteria in polymeric hydrogel

Diksha Shrestha, Deborah Okyere, Sam Mortenson, Jingyi Chen, and Yong Wang

Phys. Rev. E 112, 054404 (2025) - Published 6 November, 2025

#BiophysicsSpotlight #TheoryExperiment #ElegantVisuals

EDITORS' SUGGESTION

Effect of stereochemical constraints on the structural properties of folded proteins

Jack A. Logan, Jacob Sumner, Alex T. Grigas, Mark D. Shattuck, and Corey S. O'Hern

Phys. Rev. E 112, 054405 (2025) - Published 6 November, 2025

#BiophysicsSpotlight #TheoryExperiment #WellStructured

Coarsening dynamics of chemotactic aggregates

Henrik Weyer, David Muramatsu, and Erwin Frey

Phys. Rev. E 112, 054406 (2025) - Published 10 November, 2025

Intergenerational scaling law determines the precision kinematics of stochastic individual-cell-size homeostasis

Kunaal Joshi, Charles S. Wright, Rudro R. Biswas, and Srividya Iyer-Biswas

Phys. Rev. E 112, 054407 (2025) - Published 10 November, 2025

Instability of a fluctuating biomimetic membrane driven by an applied uniform dc electric field

Zongxin Yu, Shuozhen Zhao, Michael J. Miksis, and Petia M. Vlahovska

Phys. Rev. E 112, 054408 (2025) - Published 13 November, 2025

Geometric phase in the Crow-Kimura model of molecular evolution on dynamic environments

Vladimir Suvorov, Ricard Solé, and David B. Saakian

Phys. Rev. E 112, 054409 (2025) - Published 17 November, 2025

Boundary homogenization and numerical modeling of solute transport across the blood-brain barrier

Reza Yousofvand, Gregory Handy, and Jeffrey Tithof

Phys. Rev. E 112, 054410 (2025) - Published 21 November, 2025

Relevance of the computational models of bacterial interactions in the simulation of biofilm growth

Gabriel Santos-Díaz, Álvaro Rodríguez-Rivas, and Alejandro Cuetos

Phys. Rev. E 112, 054411 (2025) - Published 24 November, 2025

Fluid Dynamics

Hydrodynamic interactions of two nearby flagellated microswimmers

Chaojie Mo, Caoxing Mo, Qingfei Fu, Lijun Yang, and Longfei Chen

Phys. Rev. E 112, 055101 (2025) - Published 4 November, 2025

Hydrodynamics of magnetic nanorods

Robert Kuszelewicz

Phys. Rev. E 112, 055102 (2025) - Published 4 November, 2025

Local volume-conserving lattice Boltzmann model for incompressible multiphase flows

Fang Xiong, Lei Wang, and Xinyue Liu

Phys. Rev. E 112, 055103 (2025) - Published 6 November, 2025

Correlated internal waves in the nonlocal Ostrovsky equation

Junchao Sun, Xiaoyan Tang, and Yong Chen

Phys. Rev. E 112, 055104 (2025) - Published 12 November, 2025

Characterizing the Reynolds number dependence of the chaotic attractor in two-dimensional turbulence with dimension-minimizing autoencoders

Andrew Cleary and Jacob Page

Phys. Rev. E 112, 055105 (2025) - Published 12 November, 2025

Taylor dispersion in an oscillatory squeeze flow of an Oldroyd-B fluid between hydrophobic disks

G. Mederos, J. Arcos, O. Bautista, and F. Méndez

Phys. Rev. E 112, 055106 (2025) - Published 12 November, 2025

Tunneling of walking oil drops

Mogens T. Levinsen

Phys. Rev. E 112, 055107 (2025) - Published 12 November, 2025

Synthetic turbulence via an instanton gas approximation

Timo Schorlepp, Katharina Kormann, Jeremiah Lübke, Tobias Schäfer, and Rainer Grauer

Phys. Rev. E 112, 055108 (2025) - Published 17 November, 2025

Motion of an ellipsoidal particle in shear flow: Analyzing memory effect influence through exact solutions investigation

Elhoussine Azroul and Ghizlane Diki

Phys. Rev. E 112, 055109 (2025) - Published 17 November, 2025

Microswimmer locomotion and hydrodynamics in Brinkman flows

Francisca Guzmán-Lastra and Enkeleida Lushi

Phys. Rev. E 112, 055110 (2025) - Published 18 November, 2025

Stochastic model for mixing interface evolution through three-dimensional fracture networks

Daniel M. C. Hallack, Diogo Bolster, Jeffrey D. Hyman, Matthew R. Sweeney, and Hari S. Viswanathan

Phys. Rev. E 112, 055111 (2025) - Published 18 November, 2025

Admissibility of solitary wave modes in long-runout debris flows

Louis-S. Bouchard and Seulgi Moon

Phys. Rev. E 112, 055112 (2025) - Published 24 November, 2025

Plasma Physics

EDITORS' SUGGESTION

Relativistic multistage resonant and trailing-field acceleration induced by large-amplitude Alfvén waves in a strong magnetic field

S. Isayama, S. Matsukiyo, T. Sano, and S. H. Chen

Phys. Rev. E 112, 055201 (2025) - Published 4 November, 2025

#AdvancingField

Strong-field ionization in particle-in-cell simulations

A. A. Mironov, E. G. Gelfer, I. I. Tupitsyn, A. Beck, M. Jirka, O. Klimo, S. Meuren, G. Oberreit, T. Smorodnikova, R. Taïeb, S. Weber, C. Riconda, M. Grech, and S. V. Popruzhenko

Phys. Rev. E 112, 055202 (2025) - Published 4 November, 2025

Quantum theory of spectral line broadening by plasma oscillations

Thomas A. Gomez, Andrew Baczewski, Mark C. Zammit, Christopher J. Fontes, Adam F. Kowalski, and Jackson White

Phys. Rev. E 112, 055203 (2025) - Published 10 November, 2025

Amplification of laser imprint in the presence of strong, externally imposed, target-normal magnetic fields

Luke Ceurvorst, Christopher Walsh, Gabriel Pérez-Callejo, Victorien Bouffetier, Philip Bradford, Jonathan L. Peebles, Suxing Hu, Wolfgang Theobald, and Alexis Casner

Phys. Rev. E 112, 055204 (2025) - Published 10 November, 2025

Fractional radial transport in cylindrical geometry

R. Sánchez, D. E. Newman, and J. A. Mier

Phys. Rev. E 112, 055205 (2025) - Published 13 November, 2025

Self-similar multishock implosions for ultrahigh compression of matter

M. Murakami

Phys. Rev. E 112, 055206 (2025) - Published 17 November, 2025

EDITORS' SUGGESTION

Nonideal stability analysis of differentially rotating plasmas with global curvature effects

Alexander Haywood and Fatima Ebrahimi

Phys. Rev. E 112, 055207 (2025) - Published 17 November, 2025

#AdvancingField #ClearMotivation

Statistical analysis of breakdown voltages in helium: Critical anomalies and gas-liquid transition

H. Muneoka, T. Koike, S. Stauss, T. Ito, and K. Terashima

Phys. Rev. E 112, 055208 (2025) - Published 21 November, 2025

Mach reflection and formation of transient toroidal helium plasma

Vincent L. Kooij and Dirk Bouwmeester

Phys. Rev. E 112, 055209 (2025) - Published 25 November, 2025

Computational Physics, Machine Learning, and Artificial Intelligence

EDITORS' SUGGESTION

Geometric dynamics of signal propagation predict trainability of transformers

Aditya Cowsik, Tamra Nebabu, Xiaoliang Qi, and Surya Ganguli

Phys. Rev. E 112, 055301 (2025) - Published 3 November, 2025

#MachineLearningSpotlight #WellStructured #AdvancingField

Accuracy and limitations of machine-learned interatomic potentials for magnetic systems: A case study on Fe-Cr-C

E. O. Khazieva, N. M. Chtchelkatchev, N. N. Katkov, and R. E. Ryltsev

Phys. Rev. E 112, 055302 (2025) - Published 4 November, 2025

Classical algorithm inspired by the feedback-based algorithm for quantum optimization and local counterdiabatic driving

Takuya Hatomura

Phys. Rev. E 112, 055303 (2025) - Published 4 November, 2025

Critical prediction of first-order phase transitions based on next-generation reservoir computing

Zhonghua Zhang, Liang Wang, and Wei Xu

Phys. Rev. E 112, 055304 (2025) - Published 5 November, 2025

Treecode solver for the calculation of demagnetizing field in general domains

Zixuan Cui, Lei Yang, and Guanghui Hu

Phys. Rev. E 112, 055305 (2025) - Published 6 November, 2025

Simulation of spin dephasing in arbitrary susceptibility fields using physics-informed neural networks

L. T. Rotkopf, J. C. Holzschuh, H.-P. Schlemmer, and C. H. Ziener

Phys. Rev. E 112, 055306 (2025) - Published 6 November, 2025

Truncating loopy tensor networks by zero-mode gauge fixing

Ihor Sokolov, Yintai Zhang, and Jacek Dziarmaga

Phys. Rev. E 112, 055307 (2025) - Published 7 November, 2025

Machine-learning-enhanced collision operator for the lattice Boltzmann method based on invariant networks

Mario Christopher Bedrunka, Tobias Horstmann, Ben Picard, Dirk Reith, and Holger Foysi

Phys. Rev. E 112, 055308 (2025) - Published 12 November, 2025

QPP-RNG: A conceptual quantum system for true randomness

Yurang (Randy) Kuang

Phys. Rev. E 112, 055309 (2025) - Published 12 November, 2025

High-efficiency rarefied neutral gas computational model for plasma simulation

Renfan Mao, Junxue Ren, Zeyang Wang, Wudi Luo, Yibai Wang, Zhihui Li, and Haibin Tang

Phys. Rev. E 112, 055310 (2025) - Published 13 November, 2025

Thinning algorithms for the Monte Carlo simulation of kinetic Ising models

V. I. Tokar and H. Dreyssé

Phys. Rev. E 112, 055311 (2025) - Published 17 November, 2025

Variational quantum simulation of thermal relaxation in open qubit systems with nonadditive dissipation

Lucas Q. Galvão, Antonio Cesar do Prado Rosa Junior, Marcelo A. Moret, and Clebson S. Cruz

Phys. Rev. E 112, 055312 (2025) - Published 20 November, 2025

Advancing material modeling in hydrocodes using a concurrent finite-element and molecular dynamics multiscale framework

Tim A. Linke, Dane M. Sterbentz, Jean-Pierre R. Delplanque, Sebastien Hamel, Kevin A. Korner, Philip C. Myint, Lorin X. Benedict, and Jonathan L. Belof

Phys. Rev. E 112, 055313 (2025) - Published 21 November, 2025