We study the coevolution of a generalized Glauber dynamics for Ising spins with tunable threshold and of the graph topology where the dynamics takes place. This simple coevolution dynamics generates a rich phase diagram in the space of the two parameters of the model, the threshold and the rewiring probability. The diagram displays phase transitions of different types: spin ordering, percolation, and connectedness. At variance with traditional coevolution models, in which all spins of each connected component of the graph have equal value in the stationary state, we find that, for suitable choices of the parameters, the system may converge to a state in which spins of opposite sign coexist in the same component organized in compact clusters of like-signed spins. Mean field calculations enable one to estimate some features of the phase diagram.

We experimentally demonstrate and numerically simulate an adaptive method to maintain synchronization between coupled nonlinear chaotic oscillators, when the coupling between the systems is unknown and time-varying (e.g., due to environmental parameter drift). The technique is applied to optoelectronic feedback loops exhibiting high-dimensional chaotic dynamics. In addition to keeping the two systems isochronally synchronized in the presence of a priori unknown time-varying coupling strength, the technique provides an estimate of the time-varying coupling.

It is possible in principle to probe the many-atom potential surface using density functional theory (DFT). This will allow us to apply DFT to the Hamiltonian formulation of atomic motion in monatomic liquids by Wallace [Phys. Rev. E 56, 4179 (1997)]. For a monatomic system, analysis of the potential surface is facilitated by the random and symmetric classification of potential-energy valleys. Since the random valleys are numerically dominant and uniform in their macroscopic potential properties, only a few quenches are necessary to establish these properties. Here we describe an efficient technique for doing this. Quenches are done from easily generated “stochastic” configurations, in which the nuclei are distributed uniformly within a constraint limiting the closeness of approach. For metallic Na with atomic pair potential interactions, it is shown that quenches from stochastic configurations and quenches from equilibrium liquid molecular dynamics configurations produce statistically identical distributions of the structural potential energy. Again for metallic Na, it is shown that DFT quenches from stochastic configurations provide the parameters which calibrate the Hamiltonian. A statistical mechanical analysis shows how the underlying potential properties can be extracted from the distributions found in quenches from stochastic configurations.

The adsorption-desorption kinetics is discussed in the framework of the kinetic lattice-gas model. The master equation formalism has been introduced to describe the evolution of the system, where the transition probabilities are written as an expansion of the occupation configurations of all neighboring sites. Since the detailed balance principle determines half of the coefficients that arise from the expansion, it is necessary to introduce ad hoc, a dynamic scheme to get the rest of them. Three schemes of the so-called hard dynamics, in which the probability of transition from single site cannot be factored into a part which depends only on the interaction energy and one that only depends on the field energy, and five schemes of the so-called soft dynamics, in which this factorization is possible, were introduced for this purpose. It is observed that for the hard dynamic schemes, the equilibrium and nonequilibrium observables, such as adsorption isotherms, sticking coefficients, and thermal desorption spectra, have a normal or physical sustainable behavior. While for the soft dynamics schemes, with the exception of the transition state theory, the equilibrium and nonequilibrium observables have several problems. Some of them can be regarded as abnormal behavior.

Langevin equation with a multiplicative stochastic force is considered. That force is uncorrelated, it has the Lévy distribution and the power-law intensity. The Fokker-Planck equations, which correspond both to the Itô and Stratonovich interpretation, are presented. They are solved for the case without drift and for the harmonic oscillator potential. The variance is evaluated; it is always infinite for the Itô case whereas for the Stratonovich one it can be finite and rise with time slower that linearly, which indicates subdiffusion. Analytical results are compared with numerical simulations.

The kinetics of lipofuscin growth in diseased retinal pigment epithelium cells is investigated using Monte Carlo simulations and scaling theory on a cluster aggregation model. The model captures the essential physics of lipofuscin growth in the cells. A remarkable feature is that small particles may be removed from the cells while the larger ones become fixed and grow by aggregation. Model simulations are compared to the number of lipofuscin granules in eyes with early age-related degeneration.

We discuss a class of generalized wormlike chain models of polymers with spontaneous curvature and show that the density of states and consequently the entropy of such natively bent polymers are higher than that of straight ones. This effect changes the classical Langmuir binding isotherm by giving rise to enhanced binding of DNA-bending proteins.

Evolutionary prisoner’s dilemma games are studied with players located on square lattice and random regular graph defining four neighbors for each one. The players follow one of the three strategies: tit-for-tat, unconditional cooperation, and defection. The simplified payoff matrix is characterized by two parameters: the temptation $b$ to choose defection and the cost $c$ of inspection reducing the income of tit-for-tat. The strategy imitation from one of the neighbors is controlled by pairwise comparison at a fixed level of noise. Using Monte Carlo simulations and the extended versions of pair approximation we have evaluated the $b\text{−}c$ phase diagrams indicating a rich plethora of phase transitions between stationary coexistence, absorbing, and oscillatory states, including continuous and discontinuous phase transitions. By reasonable costs the tit-for-tat strategy prevents extinction of cooperators across the whole span of $b$ determining the prisoner’s dilemma game, irrespective of the connectivity structure. We also demonstrate that the system can exhibit a repetitive succession of oscillatory and stationary states upon changing a single payoff value, which highlights the remarkable sensitivity of cyclical interactions on the parameters that define the strength of dominance.

It has been shown that the so-called “wavelet phase” (or “time-scale”) synchronization of chaotic signals is actually synchronization of smoothed functions with reduced chaotic fluctuations. This fact is based on the representation of the wavelet transform with the Morlet wavelet as a solution of the Cauchy problem for a simple diffusion equation with initial condition in a form of harmonic function modulated by a given signal. The topological background of the resulting effect is discussed. It is argued that the wavelet phase synchronization provides information about the synchronization of an averaged motion described by bounding tori instead of the fine-level classical chaotic phase synchronization.

The Markovian diffusion theory is generalized within the framework of the special theory of relativity. Since the velocity space in relativity is a hyperboloid, the mathematical stochastic calculus on Riemanian manifolds can be applied but adopted here to the velocity space. A generalized Langevin equation in the fiber space of position, velocity, and orthonormal velocity frames is defined from which the generalized relativistic Kramers equation in the phase space in external force fields is derived. The obtained diffusion equation is invariant under Lorentz transformations and its stationary solution is given by the Jüttner distribution. Besides, a nonstationary analytical solution is derived for the example of force-free relativistic diffusion.

By using wedged thin films, we have measured the effect of interfaces on the ordering of an anisotropic fluid in real space. Symmetric diblock copolymers can form an ordered lamellar fluid, and the preference of the substrate for one of the blocks can induce order well into the disordered bulk phase. The induced order decays away from the substrate with a length scale that diverges at the bulk ordering transition. Ordering and disordering kinetics are found to differ: all layers relax identically upon disordering, whereas the formation of lamellae is found to vary with the distance from the substrate and can be understood from the time-dependent Ginzburg-Landau theory.

The transport of energetic electron beams generated from aluminum foils irradiated by ultraintense laser pulses has been studied by imaging coherent transition radiation from the rear side of the target. Two distinct beams of MeV electrons are emitted from the target rear side at the same time. This measurement indicates that two different mechanisms, namely resonance absorption and $\mathit{j}\times \mathit{B}$ heating, accelerate the electrons at the targets front side and drive them to different directions, with different temperatures. This interpretation is consistent with 3D-particle-in-cell simulations.

Recently, the abundance of digital data is enabling the implementation of graph-based ranking algorithms that provide system level analysis for ranking publications and authors. Here, we take advantage of the entire Physical Review publication archive (1893–2006) to construct authors’ networks where weighted edges, as measured from opportunely normalized citation counts, define a proxy for the mechanism of scientific credit transfer. On this network, we define a ranking method based on a diffusion algorithm that mimics the spreading of scientific credits on the network. We compare the results obtained with our algorithm with those obtained by local measures such as the citation count and provide a statistical analysis of the assignment of major career awards in the area of physics. A website where the algorithm is made available to perform customized rank analysis can be found at the address http://www.physauthorsrank.org.

Hydrodynamic and magnetohydrodynamic numerical studies of a mechanically forced two-vortex flow inside a sphere are reported. The simulations are performed in the intermediate regime between the laminar flow and developed turbulence, where a hydrodynamic instability is found to generate internal waves with a characteristic $m=2$ zonal wave number. It is shown that this time-periodic flow acts as a dynamo, although snapshots of the flow as well as the mean flow are not dynamos. The magnetic fields’ growth rate exhibits resonance effects depending on the wave frequency. Furthermore, a cyclic self-killing and self-recovering dynamo based on the relative alignment of the velocity and magnetic fields is presented. The phenomena are explained in terms of a mixing of nonorthogonal eigenstates of the time-dependent linear operator of the magnetic induction equation. The potential relevance of this mechanism to dynamo experiments is discussed.

In the context of the Markovian dynamical evolution in a nonstationary thermal bath, we construct a family of fluctuation relations for the entropy production that are not verified by the work performed on the system. We exhibit fluctuation relations, which are global versions either of the generalized fluctuation-dissipation theorem around a nonequilibrium diffusion or of the usual fluctuation-dissipation theorem for energy resulting from a pulse of temperature.

We present a detailed analytical and numerical study of the avalanche distributions of the continuous damage fiber bundle model (CDFBM). Linearly elastic fibers undergo a series of partial failure events which give rise to a gradual degradation of their stiffness. We show that the model reproduces a wide range of mechanical behaviors. We find that macroscopic hardening and plastic responses are characterized by avalanche distributions, which exhibit an algebraic decay with exponents between 5/2 and 2 different from those observed in mean-field fiber bundle models. We also derive analytically the phase diagram of a family of CDFBM which covers a large variety of potential avalanche size distributions. Our results provide a unified view of the statistics of breaking avalanches in fiber bundle models.

We consider the deterministic escape dynamics of a lattice chain of harmonically coupled particles from a metastable state over a one-dimensional potential barrier. While the case of periodic lattices has already been elaborated, the aim of the present work is to explore the extension to nonperiodic, i.e., disordered, lattices. Each particle evolves in an individual local potential, which is characterized by a harmonic term and a nonlinear term. Two kinds of parametric disorder are considered. “Disorder in nonlinearity” is only caused by different nonlinear terms—“disorder in harmonicity” only by different harmonic terms. We assure that the two kinds of disorder, with their individual potential barriers uniformly distributed around a globally equal mean barrier height, exhibit a comparable strength of disorder. Starting with an initial completely delocalized state, we observe localization of energy and formation of breathers ensues. It is shown that increasing disorder in nonlinearity decreases the mean escape time opposite to increasing mean escape times resulting from increased disorder in harmonicity. Comparison with the mean escape time obtained for a third kind of parametric disorder characterized by overall equal barrier heights leads to the conclusion that indeed inhomogeneous barriers facilitate the speedy escape.

We apply the method of invariant manifolds to derive equations of generalized hydrodynamics from the linearized Boltzmann equation and determine exact transport coefficients, obeying Green-Kubo formulas. Numerical calculations are performed in the special case of Maxwell molecules. We investigate, through the comparison with experimental data and former approaches, the spectrum of density fluctuations and address the regime of finite Knudsen numbers and finite frequencies hydrodynamics.

In this work we examine layer fluctuations in a smectic elastomer with quenched random disorder induced by crosslinks. The system is analyzed in a continuum model and crosslinks are introduced as a random field in a macroscopic picture. In the case of small deformations and replica symmetry the intensity profile for x-ray scattering along the layer normal was determined for layer displacements smaller than the layer separation. In this regime it is predicted that for large enough crosslink densities the first-order diffraction pattern of the solid assumes a characteristic squared-Lorentzian form, showing a decay of short-range order over a length scale of 20 nm. Crosslinks are observed to disorder the system by decreasing the correlation length, which we show not to be a consequence of the random field. The coupling to random crosslinks is predicted to retard the decrease in the correlation length and hence found to stabilize the one-dimensional periodic layer structure against thermal fluctuations. The dependence of the correlation length on the crosslink density leads us to propose an estimate for the percolation limit of a smectic elastomer network.

Aging dynamics was investigated in the glassy states of poly(2-chlorostyrene) by measuring the complex electrical capacitance during aging below the glass transition temperature. The variations with time and temperature of the ac dielectric susceptibility and volume could be determined by simply measuring the variation in the complex electrical capacitance. Isothermal aging at a given temperature for several hours after an intermittent stop in constant-rate cooling is stored in the deviations of both the real and imaginary parts of the complex ac dielectric susceptibility and volume. During cooling after isothermal aging, the deviation of the ac dielectric susceptibility from the reference value decreases and almost vanishes at room temperature. By contrast, the deviation in volume induced during isothermal aging remains almost constant during cooling. The simultaneous measurement of ac dielectric susceptibility and volume clearly revealed that the ac dielectric susceptibility exhibits a full rejuvenation effect, whereas the volume does not show any rejuvenation effects. We discuss a plausible model that can reproduce the present experimental results.