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    Spectral densities approximations of incidence-based locally treelike hypergraph matrices via the cavity method

    Grover E. C. Guzman*

    Peter F. Stadler†

    Andre Fujita‡

    • Department of Computer Science, Institute of Mathematics and Statistics, University of São Paulo, Rua do Matão, 1010, São Paulo - SP 05508-090, Brazil

    • Bioinformatics Group, Department of Computer Science, Interdisciplinary Center for Bioinformatics, German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Competence Center for Scalable Data Services and Solutions Dresden-Leipzig, Konrad Zuse School of Excellence in Embedded Composite AI Dresden/Leipzig (SECAI), Leipzig University, Härtelstraße 16-18, D-04107 Leipzig, Germany; Max Planck Institute for Mathematics in the Sciences, Inselstraße 22, D-04103 Leipzig, Germany; Institute for Theoretical Chemistry, University of Vienna, Währingerstraße 17, A-1090 Wien, Austria; Facultad de Ciencias, Universidad Nacional de Colombia, Sede Bogotá, Colombia; and The Santa Fe Institute, 1399 Hyde Park Rd., Santa Fe, New Mexico 87501, United States

    • Department of Computer Science, Institute of Mathematics and Statistics, University of São Paulo, Rua do Matão, 1010, São Paulo - SP 05508-090, Brazil and Division of Network AI Statistics, Medical Institute of Bioregulation, Kyushu University, Maidashi 3-1-1, Higashi-ku, Fukuoka, 812-8582, Japan

    • *Contact author: grover@usp.br
    • †Contact author: Peter.Stadler@bioinf.uni-leipzig.de
    • ‡Contact author: andrefujita@usp.br

    Phys. Rev. E 113, 014309 – Published 12 January, 2026

    DOI: https://doi.org/10.1103/g997-gp7j

    Abstract

    Network science has significantly advanced our understanding of complex systems by representing them as graphs. Vertices correspond to system components, and edges capture pairwise interactions. However, many real-world systems (e.g., chemical reactions, brain networks, scientific collaborations) involve higher-order interactions that graphs fail to capture fully. Hypergraphs offer a more suitable framework, allowing interactions among multiple components, with each hyperedge connecting an arbitrary number of vertices. While significant progress has been made in studying the spectral properties of the matrix representation of a hypergraph, less attention has been given to efficiently computing its spectral density. Existing approaches primarily rely on direct diagonalization, which scales cubically with the number of vertices and is thus computationally prohibitive for large hypergraphs. In this work, we develop an efficient method for computing the spectral density of the signless Laplacian, adjacency, and Laplacian matrices of weighted hypergraphs using the cavity method. The cavity method is based on the incidence matrix, the most common way to represent hypergraphs. We further refine this approach to derive a more efficient method for unweighted hypergraphs that requires only the degree and order sequences. Finally, we validate the effectiveness of our processes demonstrating their computational efficiency and accuracy.

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