- Open Access
Long-range topotaxis as a result of supercellular topographic anisotropy during chemotaxis
Phys. Rev. Research 8, 023234 – Published 1 June, 2026
DOI: https://doi.org/10.1103/pgrv-kj8x
Abstract
Highly motile cells, like patrolling leukocytes during immune response and amoeboid sarcoma cells during metastasis, navigate relatively long distances in complex environments where they encounter a wide variety of topographic structures on different length scales. Subcellular topographic substrate anisotropies have been shown to cause a drift in cell migration (topotaxis) in vitro, indicating that the topography of the extracellular environment can function as a physical guidance cue. Here, we expand on these previously reported subcellular findings by showing that supercellular asymmetries spanning long distances can also induce topotactic drift. Such long-range topotactic drift was generated by exposing highly motile cells to a subtle spatial gradient in the arrangement of cell-sized pillars. Using an analytical model and mean first-passage time analyses, we show that this type of long-range topotaxis emerges through the many interactions of persistently random migrating cells with the anisotropic confinement imposed by the gradient pillar field. We demonstrate that pillar-induced long-range topotaxis is conserved during chemotaxis, the cellular drift in response to chemical gradients. Topotactic and chemotactic drifts were found to add linearly, a finding that could have implications for in vivo studies on directed cell migration, which mostly focus on chemotactic responses alone. Moreover, as long-range topotaxis is an independent physical effect, it offers a way to steer highly motile cells independently from chemotactic guidance, which could have potential applications in cell sorting and tissue engineering.
Physics Subject Headings (PhySH)
- Brownian motion
- Cell migration
- Chemotaxis
- Classical statistical mechanics
- Engineering
- Escape problems
- Image processing
- Microparticles
- Random walks
- Self-propelled particles
- Stochastic processes
- Cells
- Brownian dynamics
- Coarse graining
- Data analysis
- Fokker–Planck equation
- Markovian processes
- Statistical methods
- Stochastic analysis
Article Text
Supplemental Material
References (87)
- R. J. Petrie, A. D. Doyle, and K. M. Yamada, Random versus directionally persistent cell migration, Nat. Rev. Mol. Cell Biol. 10, 538 (2009).
- L. L. Rodriguez and I. C. Schneider, Directed cell migration in multi-cue environments, Integr. Biol. 5, 1306 (2013).
- P. J. M. Van Haastert and P. N. Devreotes, Chemotaxis: Signalling the way forward, Nat. Rev. Mol. Cell Biol. 5, 626 (2004).
- D. J. Cohen, W. J. Nelson, and M. M. Maharbiz, Galvanotactic control of collective cell migration in epithelial monolayers, Nat. Mater. 13, 409 (2014).
- K. L. Poff and M. Skokut, Thermotaxis by pseudoplasmodia of Dictyostelium discoideum, Proc. Natl. Acad. Sci. USA 74, 2007 (1977).
- G. Charras and E. Sahai, Physical influences of the extracellular environment on cell migration, Nat. Rev. Mol. Cell Biol. 15, 813 (2014).
- G. Mahmud, C. J. Campbell, K. J. M. Bishop, Y. A. Komarova, O. Chaga, S. Soh, S. Huda, K. Kandere-Grzybowska, and B. A. Grzybowski, Directing cell motions on micropatterned ratchets, Nat. Phys. 5, 606 (2009).
- M. Le Berre, Y. J. Liu, J. Hu, P. Maiuri, O. Bénichou, R. Voituriez, Y. Chen, and M. Piel, Geometric friction directs cell migration, Phys. Rev. Lett. 111, 198101 (2013).
- D. Caballero, R. Voituriez, and D. Riveline, Protrusion fluctuations direct cell motion, Biophys. J. 107, 34 (2014).
- D. Caballero, J. Comelles, M. Piel, R. Voituriez, and D. Riveline, Ratchetaxis: Long-range directed cell migration by local cues, Trends Cell Biol. 25, 815 (2015).
- J. S. Park, D. H. Kim, and A. Levchenko, Topotaxis: A new mechanism of directed cell migration in topographic ECM gradients, Biophys. J. 114, 1257 (2018).
- A. Curtis and C. Wilkinson, Topographical control of cells, Biomaterials 18, 1573 (1997).
- C. Metzner, C. Mark, J. Steinwachs, L. Lautscham, F. Stadler, and B. Fabry, Superstatistical analysis and modelling of heterogeneous random walks, Nat. Commun. 6, 7516 (2015).
- L. A. Lautscham, C. Kammerer, J. R. Lange, T. Kolb, C. Mark, A. Schilling, P. L. Strissel, R. Strick, C. Gluth, A. C. Rowat, C. Metzner, and B. Fabry, Migration in confined 3D environments is determined by a combination of adhesiveness, nuclear volume, contractility, and cell stiffness, Biophys. J. 109, 900 (2015).
- Y.-G. Ko, C. C. Co, and C.-C. Ho, Gradient-free directional cell migration in continuous microchannels, Soft Matter 9, 2467 (2013).
- C. D. Paul, W. C. Hung, D. Wirtz, and K. Konstantopoulos, Engineered models of confined cell migration, Annu. Rev. Biomed. Eng. 18, 159 (2016).
- J. Comelles, D. Caballero, R. Voituriez, V. Hortigüela, V. Wollrab, A. L. Godeau, J. Samitier, E. Martínez, and D. Riveline, Cells as active particles in asymmetric potentials: Motility under external gradients, Biophys. J. 107, 1513 (2014).
- A. Fink, D. B. Brückner, C. Schreiber, P. J. Röttgermann, C. P. Broedersz, and J. O. Rädler, Area and geometry dependence of cell migration in asymmetric two-state micropatterns, Biophys. J. 118, 552 (2020).
- W. A. Loesberg, J. te Riet, F. C. M. J. M. van Delft, P. Schön, C. G. Figdor, S. Speller, J. J. W. A. van Loon, X. F. Walboomers, and J. A. Jansen, The threshold at which substrate nanogroove dimensions may influence fibroblast alignment and adhesion, Biomaterials 28, 3944 (2007).
- D. Gallego-Perez, N. Higuita-Castro, L. Denning, J. DeJesus, K. Dahl, A. Sarkar, and D. J. Hansford, Microfabricated mimics of in vivo structural cues for the study of guided tumor cell migration, Lab Chip 12, 4424 (2012).
- X. Sun, M. K. Driscoll, C. Guven, S. Das, C. A. Parent, J. T. Fourkas, and W. Losert, Asymmetric nanotopography biases cytoskeletal dynamics and promotes unidirectional cell guidance, Proc. Natl. Acad. Sci. USA 112, 12557 (2015).
- J. Park, D.-H. Kim, H.-N. Kim, C. J. Wang, M. K. Kwak, E. Hur, K.-Y. Suh, S. S. An, and A. Levchenko, Directed migration of cancer cells guided by the graded texture of the underlying matrix, Nat. Mater. 15, 792 (2016).
- C. Heo, C. Jeong, H. S. Im, J. U. Kim, J. Woo, J. Y. Lee, B. Park, M. Suh, and T. I. Kim, Cellular behavior controlled by bio-inspired and geometry-tunable nanohairs, Nanoscale 9, 17743 (2017).
- A. Reversat, F. Gaertner, J. Merrin, J. Stopp, S. Tasciyan, J. Aguilera, I. de Vries, R. Hauschild, M. Hons, M. Piel, A. Callan-Jones, R. Voituriez, and M. Sixt, Cellular locomotion using environmental topography, Nature (London) 582, 582 (2020).
- L. Pieuchot, J. Marteau, A. Guignandon, T. Dos Santos, I. Brigaud, P. F. Chauvy, T. Cloatre, A. Ponche, T. Petithory, P. Rougerie, M. Vassaux, J. L. Milan, N. Tusamda Wakhloo, A. Spangenberg, M. Bigerelle, and K. Anselme, Curvotaxis directs cell migration through cell-scale curvature landscapes, Nat. Commun. 9, 3995 (2018).
- K. Poole, K. Khairy, J. Friedrichs, C. Franz, D. A. Cisneros, J. Howard, D. Mueller, and W. Baumeister, Molecular-scale topographic cues induce the orientation and directional movement of fibroblasts on two-dimensional collagen surfaces, J. Mol. Biol. 349, 380 (2005).
- A. D. Doyle, F. W. Wang, K. Matsumoto, and K. M. Yamada, One-dimensional topography underlies three-dimensional fibrillar cell migration, J. Cell Biol. 184, 481 (2009).
- M. Chabaud, M. L. Heuzé, M. Bretou, P. Vargas, P. Maiuri, P. Solanes, M. Maurin, E. Terriac, M. Le Berre, D. Lankar, T. Piolot, R. S. Adelstein, Y. Zhang, M. Sixt, J. Jacobelli, O. Bénichou, R. Voituriez, M. Piel, and A.-M. Lennon-Duménil, Cell migration and antigen capture are antagonistic processes coupled by myosin II in dendritic cells, Nat. Commun. 6, 7526 (2015).
- T. Bretschneider, H. G. Othmer, C. J. Weijer, and H. G. Othmer, Progress and perspectives in signal transduction, actin dynamics, and movement at the cell and tissue level: Lessons from Dictyostelium, Interface Focus 6, 20160047 (2016).
- V. Torraca, S. Masud, H. P. Spaink, and A. H. Meijer, Macrophage-pathogen interactions in infectious diseases: New therapeutic insights from the zebrafish host model, Dis. Models Mech. 7, 785 (2014).
- D. Powell, S. Tauzin, L. E. Hind, Q. Deng, D. J. Beebe, and A. Huttenlocher, Chemokine signaling and the regulation of bidirectional leukocyte migration in interstitial tissues, Cell Rep. 19, 1572 (2017).
- C. D. Paul, P. Mistriotis, and K. Konstantopoulos, Cancer cell motility: Lessons from migration in confined spaces, Nat. Rev. Cancer 17, 131 (2017).
- R. G. Rowe and S. J. Weiss, Navigating ECM barriers at the invasive front: The cancer cell-stroma interface, Annu. Rev. Cell Dev. Biol. 25, 567 (2009).
- S. Huda, B. Weigelin, K. Wolf, K. V. Tretiakov, K. Polev, G. Wilk, M. Iwasa, F. S. Emami, J. W. Narojczyk, M. Banaszak, S. Soh, D. Pilans, A. Vahid, M. Makurath, P. Friedl, G. G. Borisy, K. Kandere-Grzybowska, and B. A. Grzybowski, Lévy-like movement patterns of metastatic cancer cells revealed in microfabricated systems and implicated in vivo, Nat. Commun. 9, 4539 (2018).
- P. Kameritsch and J. Renkawitz, Principles of leukocyte migration strategies, Trends Cell Biol. 30, 818 (2020).
- G. Cicchetti, P. G. Allen, and M. Glogauer, Targeting molecular signaling pathways in neutrophils: From receptor to actin assembly, Crit. Rev. Oral Biol. Med. 13, 220 (2002).
- E. Kolaczkowska and P. Kubes, Neutrophil recruitment and function in health and inflammation, Nat. Rev. Immunol. 13, 159 (2013).
- A. Shellard and R. Mayor, All roads lead to directional cell migration, Trends Cell Biol. 30, 852 (2020).
- L. Song, S. M. Nadkarni, H. U. Bödeker, C. Beta, A. Bae, C. Franck, W. J. Rappel, W. F. Loomis, and E. Bodenschatz, Dictyostelium discoideum chemotaxis: Threshold for directed motion, Eur. J. Cell Biol. 85, 981 (2006).
- B. Meier, A. Zielinski, C. Weber, D. Arcizet, S. Youssef, T. Franosch, J. O. Rädler, and D. Heinrich, Chemotactic cell trapping in controlled alternating gradient fields, Proc. Natl. Acad. Sci. USA 108, 11417 (2011).
- E. T. Roussos, J. S. Condeelis, and A. Patsialou, Chemotaxis in cancer, Nat. Rev. Cancer 11, 573 (2011).
- H. Takagi, M. J. Sato, T. Yanagida, and M. Ueda, Functional analysis of spontaneous cell movement under different physiological conditions, PLoS One 3, e2648 (2008).
- D. Arcizet, S. Capito, M. Gorelashvili, C. Leonhardt, M. Vollmer, S. Youssef, S. Rappl, and D. Heinrich, Contact-controlled amoeboid motility induces dynamic cell trapping in 3D-microstructured surfaces, Soft Matter 8, 1473 (2012).
- P. J. M. Van Haastert, Chemotaxis: Insights from the extending pseudopod, J. Cell Sci. 123, 3031 (2010).
- L. Tweedy, B. Meier, J. Stephan, D. Heinrich, and R. G. Endres, Distinct cell shapes determine accurate chemotaxis, Sci. Rep. 3, 2606 (2013).
- E. Sahai, Illuminating the metastatic process, Nat. Rev. Cancer 7, 737 (2007).
- P. Friedl, S. Borgmann, and E. B. Bröcker, Amoeboid leukocyte crawling through extracellular matrix: Lessons from the Dictyostelium paradigm of cell movement, J. Leukocyte Biol. 70, 491 (2001).
- E. A. Codling, M. J. Plank, and S. Benhamou, Random walk models in biology, J. R. Soc. Interface 5, 813 (2008).
- See Supplemental Material at http://link.aps.org/supplemental/10.1103/pgrv-kj8x for supplemental movies to long-range topotaxis as a result of supercellular topographic anisotropy is conserved during chemotaxis.
- J. Bonner and E. Frascella, Variations in cell size during the development of the slime mold, Dictyostelium discoiduem, Biol. Bull. 104, 297 (1953).
- M. Gorelashvili, M. Emmert, K. F. Hodeck, and D. Heinrich, Amoeboid migration mode adaption in quasi-3D spatial density gradients of varying lattice geometry, New J. Phys. 16, 075012 (2014).
- P. J. Van Haastert and M. Postmay, Biased random walk by stochastic fluctuations of chemoattractant-receptor interactions at the lower limit of detection, Biophys. J. 93, 1787 (2007).
- M. Skoge, H. Yue, M. Erickstad, A. Bae, H. Levine, A. Groisman, W. F. Loomis, and W. Rappel, Cellular memory in eukaryotic chemotaxis, Proc. Natl. Acad. Sci. USA 111, 14448 (2014).
- A. G. Cherstvy, O. Nagel, C. Beta, and R. Metzler, Non-Gaussianity, population heterogeneity, and transient superdiffusion in the spreading dynamics of amoeboid cells, Phys. Chem. Chem. Phys. 20, 23034 (2018).
- J. Wondergem, M. Mytiliniou, L. van Steijn, M. Janse, C. Schmeits, D. Jansen, T. Schmidt, and D. Heinrich, Comparative analysis of the effects of cell-sized obstacle crowding on amoeboid and mesenchymal cell migration (unpublished).
- A. Bagorda and C. A. Parent, Eukaryotic chemotaxis at a glance, J. Cell Sci. 121, 2621 (2008).
- D. Arcizet, B. Meier, E. Sackmann, J. O. Rädler, and D. Heinrich, Temporal analysis of active and passive transport in living cells, Phys. Rev. Lett. 101, 248103 (2008).
- D. Holcman, N. Hoze, and Z. Schuss, Narrow escape through a funnel and effective diffusion on a crowded membrane, Phys. Rev. E 84, 021906 (2011).
- R. H. Insall, P. Paschke, and L. Tweedy, Steering yourself by the bootstraps: How cells create their own gradients for chemotaxis, Trends Cell Biol. 32, 585 (2022).
- Y. Belotti, D. McGloin, and C. J. Weijer, Analysis of barotactic and chemotactic guidance cues on directional decision-making of Dictyostelium discoideum cells in confined environments, Proc. Natl. Acad. Sci. USA 117, 25553 (2020).
- E. Le Maout, S. Lo Vecchio, P. K. Korla, J. J.-C. Sheu, and D. Riveline, Ratchetaxis in channels: Entry point and local asymmetry set cell directions in confinement, Biophys. J. 119, 1301 (2020).
- P. Esfahani, H. Levine, M. Mukherjee, and B. Sun, Three-dimensional cancer cell migration directed by dual mechanochemical guidance, Phys. Rev. Res. 4, L022007 (2022).
- S.-H. Yoon, Y. K. Kim, E. D. Han, Y.-H. Seo, B. H. Kim, and M. R. K. Mofrad, Passive control of cell locomotion using micropatterns: The effect of micropattern geometry on the migratory behavior of adherent cells, Lab Chip 12, 2391 (2012).
- H. V. Prentice-Mott, Y. Meroz, A. Carlson, M. A. Levine, M. W. Davidson, D. Irimia, G. T. Charras, L. Mahadevan, and J. V. Shah, Directional memory arises from long-lived cytoskeletal asymmetries in polarized chemotactic cells, Proc. Natl. Acad. Sci. USA 113, 1267 (2016).
- H. Hashimura, Y. V. Morimoto, M. Yasui, and M. Ueda, Collective cell migration of Dictyostelium without cAMP oscillations at multicellular stages, Commun. Biol. 2, 34 (2019).
- J. A. J. Wondergem, M. Mytiliniou, F. C. H. de Wit, T. G. A. Reuvers, D. Holcman, and D. Heinrich, Chemotaxis and topotaxis add vectorially for amoeboid cell migration, bioRxiv 735779; doi: https://doi.org/10.1101/735779.
- K. Schakenraad, L. Ravazzano, N. Sarkar, J. A. J. Wondergem, R. M. H. Merks, and L. Giomi, Topotaxis of active Brownian particles, Phys. Rev. E 101, 032602 (2020).
- L. van Steijn, J. A. Wondergem, K. Schakenraad, D. Heinrich, and R. M. Merks, Deformability and collision-induced reorientation enhance cell topotaxis in dense microenvironments, Biophys. J. 122, 2791 (2023).
- M. J. Schnitzer, Theory of continuum random walks and application to chemotaxis, Phys. Rev. E 48, 2553 (1993).
- E. A. Novikova, M. Raab, D. E. Discher, and C. Storm, Persistence-driven durotaxis: Generic, directed motility in rigidity gradients, Phys. Rev. Lett. 118, 078103 (2017).
- Z. Sadjadi and H. Rieger, Topotaxis of active particles across long distances by sliding along obstacles, Phys. Rev. Res. 6, 013178 (2024).
- J. McGrath, M. Jimenez, and H. Bridle, Deterministic lateral displacement for particle separation: A review, Lab Chip 14, 4139 (2014).
- M. Emmert, P. Witzel, and D. Heinrich, Challenges in tissue engineering—Towards cell control inside artificial scaffolds, Soft Matter 12, 4287 (2016).
- Z. Chen, X. Luo, X. Zhao, M. Yang, and C. Wen, Label-free cell sorting strategies via biophysical and biochemical gradients, J. Orthop. Transl. 17, 55 (2019).
- P. Paulitschke, F. Keber, A. Lebedev, J. Stephan, H. Lorenz, S. Hasselmann, D. Heinrich, and E. M. Weig, Ultraflexible nanowire array for label- and distortion-free cellular force tracking, Nano Lett. 19, 2207 (2019).
- S. Youssef, S. Gude, and J. O. Rädler, Automated tracking in live-cell time-lapse movies, Integr. Biol. 3, 1095 (2011).
- J. Schindelin, I. Arganda-Carreras, E. Frise, V. Kaynig, M. Longair, T. Pietzsch, S. Preibisch, C. Rueden, S. Saalfeld, B. Schmid, J. Y. Tinevez, D. J. White, V. Hartenstein, K. Eliceiri, P. Tomancak, and A. Cardona, Fiji: An open-source platform for biological-image analysis, Nat. Methods 9, 676 (2012).
- A. Nandi, D. Heinrich, and B. Lindner, Distributions of diffusion measures from a local mean-square displacement analysis, Phys. Rev. E 86, 021926 (2012).
- L. Li, E. C. Cox, and H. Flyvbjerg, ‘Dicty dynamics’: Dictyostelium motility as persistent random motion, Phys. Biol. 8, 046006 (2011).
- R. Förth, Die Brownsche bewegung bei berücksichtigung einer persistenz der bewegungsrichtung. Mit anwendungen auf die bewegung lebender infusorien, Z. Phys. 2, 244 (1920).
- M. H. Gail and C. W. Boone, The locomotion of mouse fibroblasts in tissue culture, Biophys. J. 10, 980 (1970).
- D. Selmeczi, S. Mosler, P. H. Hagedorn, N. B. Larsen, and H. Flyvbjerg, Cell motility as persistent random motion: Theories from experiments, Biophys. J. 89, 912 (2005).
- D. Campos, V. Méndez, and I. Llopis, Persistent random motion: Uncovering cell migration dynamics, J. Theor. Biol. 267, 526 (2010).
- P. Dieterich, R. Klages, R. Preuss, and A. Schwab, Anomalous dynamics of cell migration, Proc. Natl. Acad. Sci. USA 105, 459 (2008).
- A. Biess, E. Korkotian, and D. Holcman, Barriers to diffusion in dendrites and estimation of calcium spread following synaptic inputs, PLoS Comput. Biol. 7, e1002182 (2011).
- Z. Schuss, Theory and Applications of Stochastic Differential Equations (John Wiley & Sons, New York, 1980), pp. 1–321.
- A. Fick, Ueber diffusion, Ann. Phys. 170, 59 (1855).