- Letter
- Open Access
Nonlinear extensions of linear inverse models under memoryless or persistent random forcing
Phys. Rev. Research 7, L032038 – Published 20 August, 2025
DOI: https://doi.org/10.1103/ds1j-fx3v
Abstract
This study extends the linear inverse modeling (LIM) framework to nonlinear settings by presenting White-nLIM and Colored-nLIM, statistics-based empirical methods that construct approximate stochastic systems incorporating quadratic deterministic dynamics with either memoryless Gaussian white noise or persistent Ornstein-Uhlenbeck colored noise. Beyond the evident improvements over linear models, Colored-nLIM offers a robust approach to parameter estimation and statistical modeling under persistent stochastic forcing. Together with White-nLIM, these methods provide a systematic framework to assess the role of noise persistence in inverse modeling. Applications to the Lorenz 63 system and a simplified El Niño-Southern Oscillation model demonstrate their potential to capture chaotic behavior and climate variability.
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References (70)
- C. Penland, Random forcing and forecasting using principal oscillation pattern analysis, Mon. Weather Rev. 117, 2165 (1989).
- C. Penland, A stochastic model of IndoPacific sea surface temperature anomalies, Physica D 98, 534 (1996).
- C. Penland and T. Magorian, Prediction of Niño 3 sea surface temperatures using linear inverse modeling, J. Clim. 6, 1067 (1993).
- C. Penland and L. Matrosova, A balance condition for stochastic numerical models with application to the El Niño-Southern Oscillation, J. Clim. 7, 1352 (1994).
- J. H. Tu, C. W. Rowley, D. M. Luchtenburg, S. L. Brunton, and J. N. Kutz, On dynamic mode decomposition: Theory and applications, J. Comput. Dyn. 1, 391 (2014).
- J. N. Kutz, S. L. Brunton, B. W. Brunton, and J. L. Proctor, Dynamic Mode Decomposition (Society for Industrial and Applied Mathematics, Philadelphia, PA, 2016).
- J. Lien, Y.-N. Kuo, H. Ando, and S. Kido, Colored linear inverse model: A data-driven method for studying dynamical systems with temporally correlated stochasticity, Phys. Rev. Res. 7, 023042 (2025).
- T. W. Muld, G. Efraimsson, and D. S. Henningson, Flow structures around a high-speed train extracted using proper orthogonal decomposition and dynamic mode decomposition, Comput. Fluids 57, 87 (2012).
- C. Pan, D. Yu, and J. Wang, Dynamical mode decomposition of Gurney flap wake flow, Theor. Appl. Mech. Lett. 1, 012002 (2011).
- S.-I. An and F.-F. Jin, Nonlinearity and asymmetry of ENSO, J. Clim. 17, 2399 (2004).
- J. Liang, X.-Q. Yang, and D.-Z. Sun, Factors determining the asymmetry of ENSO, J. Clim. 30, 6097 (2017).
- C. M. Aiken, A. Santoso, S. McGregor, and M. H. England, The 1970’s shift in ENSO dynamics: A linear inverse model perspective, Geophys. Res. Lett. 40, 1612 (2013).
- M. A. Alexander, L. Matrosova, C. Penland, J. D. Scott, and P. Chang, Forecasting pacific SSTs: Linear inverse model predictions of the PDO, J. Clim. 21, 385 (2008).
- J. Lou, T. J. O'Kane, and N. J. Holbrook, A linear inverse model of tropical and South Pacific seasonal predictability, J. Clim. 33, 4537 (2020).
- E. Di Lorenzo, G. Liguori, N. Schneider, J. C. Furtado, B. T. Anderson, and M. A. Alexander, ENSO and meridional modes: A null hypothesis for Pacific climate variability, Geophys. Res. Lett. 42, 9440 (2015).
- I. Richter, Y. Kosaka, S. Kido, and H. Tokinaga, The tropical Atlantic as a negative feedback on ENSO, Clim. Dyn. 61, 309 (2023).
- C. Wang, C. Deser, J.-Y. Yu, P. DiNezio, and A. Clement, El Niño and Southern Oscillation (ENSO): A review, in Coral Reefs of the Eastern Tropical Pacific: Persistence and Loss in a Dynamic Environment, edited by P. W. Glynn, D. P. Manzello, and I. C. Enochs, Coral Reefs of the World, Vol. 8 (Springer Netherlands, Dordrecht, 2017), pp. 85–106.
- T. DelSole, Can quasigeostrophic turbulence be modeled stochastically? J. Atmos. Sci. 53, 1617 (1996).
- T. DelSole, A fundamental limitation of Markov models, J. Atmos. Sci. 57, 2158 (2000).
- C. Martinez-Villalobos, D. J. Vimont, C. Penland, M. Newman, and J. D. Neelin, Calculating state-dependent noise in a linear inverse model framework, J. Atmos. Sci. 75, 479 (2018).
- P. D. Sardeshmukh, G. P. Compo, and C. Penland, Need for caution in interpreting extreme weather statistics, J. Clim. 28, 9166 (2015).
- S.-I. Shin, P. D. Sardeshmukh, M. Newman, C. Penland, and M. A. Alexander, Impact of annual cycle on ENSO variability and predictability, J. Clim. 34, 171 (2021).
- J. Lien, H. Ando, I. Richter, and S. Kido, Noise persistence in a cyclostationary linear inverse model framework and its impact on ENSO evolution and prediction skills, J. Atmos. Sci. (unpublished).
- C. Martinez-Villalobos, M. Newman, D. J. Vimont, C. Penland, and J. David Neelin, Observed El Niño-La Niña asymmetry in a linear model, Geophys. Res. Lett. 46, 9909 (2019).
- C. Chen, M. A. Cane, N. Henderson, D. E. Lee, D. Chapman, D. Kondrashov, and M. D. Chekroun, Diversity, nonlinearity, seasonality, and memory effect in ENSO simulation and prediction using empirical model reduction, J. Clim. 29, 1809 (2016).
- S. De, N. K. Agarwal, J. S. Chowdary, and D. Patekar, Scale interactions during ENSO—A new dynamical mechanism on unveiling ENSO-monsoon nonlinearity, Theor. Appl. Climatol. 155, 8119 (2024).
- D. Kondrashov, S. Kravtsov, A. W. Robertson, and M. Ghil, A hierarchy of data-based ENSO models, J. Clim. 18, 4425 (2005).
- D. Kondrashov, M. D. Chekroun, and M. Ghil, Data-driven non-Markovian closure models, Physica D 297, 33 (2015).
- S. Kravtsov, D. Kondrashov, and M. Ghil, Multilevel regression modeling of nonlinear processes: Derivation and applications to climatic variability, J. Clim. 18, 4404 (2005).
- A. Lück and V. Wolf, Generalized method of moments for estimating parameters of stochastic reaction networks, BMC Syst. Biol. 10, 98 (2016).
- Y. Li and Z. Wei, Dynamics and optimal control of a stochastic coronavirus (COVID-19) epidemic model with diffusion, Nonlinear Dyn. 109, 91 (2022).
- A. J. Majda and J. Harlim, Physics constrained nonlinear regression models for time series, Nonlinearity 26, 201 (2013).
- D. Olabode, J. Culp, A. Fisher, A. Tower, D. Hull-Nye, and X. Wang, Deterministic and stochastic models for the epidemic dynamics of COVID-19 in Wuhan, China, Math. Biosci. Eng. 18, 950 (2021).
- G. Schneider, P. F. Craigmile, and R. Herbei, Maximum likelihood estimation for stochastic differential equations using sequential Gaussian-process-based optimization, Technometrics 59, 178 (2017).
- J. Timmer, Parameter estimation in nonlinear stochastic differential equations, Chaos Solitons Fract. 11, 2571 (2000).
- S. Zhao, F.-F. Jin, M. F. Stuecker, P. R. Thompson, J.-S. Kug, M. J. McPhaden, M. A. Cane, A. T. Wittenberg, and W. Cai, Explainable El Niño predictability from climate mode interactions, Nature (London) 630, 891 (2024).
- L. Ljung, System Identification: Theory for the User (Prentice Hall PTR, Upper Saddle River, NJ, 1999), 2nd ed.
- X. Wang, J. Feng, Q. Liu, Y. Li, and Y. Xu, Neural network-based parameter estimation of stochastic differential equations driven by Lévy noise, Physica A 606, 128146 (2022).
- K. Lee and E. N. Johnson, State estimation using Gaussian process regression for colored noise systems, in Proceedings of the 2017 IEEE Aerospace Conference, Big Sky, MT, USA (IEEE, Piscataway, NJ, 2017), pp. 1–8.
- X. Liu and J. Lu, Least squares based iterative identification for a class of multirate systems, Automatica 46, 549 (2010).
- J. Vialard, F. F. Jin, M. J. McPhaden, A. Fedorov, W. Cai, S.-I. An, D. Dommenget, X. Fang, M. F. Stuecker, C. Wang et al., The El Niño Southern Oscillation (ENSO) recharge oscillator conceptual model: Achievements and future prospects, Reviews of Geophysics 63, e2024RG000843 (2025).
- X. Wang, J. Feng, Q. Liu, and Y. Xu, Noise-induced alternations and data-driven parameter estimation of a stochastic perceptual model, Eur. Phys. J.: Spec. Top. 234, 707 (2025).
- P. McCullagh and J. A. Nelder, Generalized Linear Models, 2nd ed. (Routledge, New York, 1989), p. 532.
- See Supplemental Material at http://link.aps.org/supplemental/10.1103/ds1j-fx3v for numerical details of the nLIMs, validation analyses, and additional results for the ENSO RO model.
- G. Gradziuk, G. Torregrosa, and C. P. Broedersz, Irreversibility in linear systems with colored noise, Phys. Rev. E 105, 024118 (2022).
- S. L. Brunton, J. L. Proctor, and J. N. Kutz, Discovering governing equations from data by sparse identification of nonlinear dynamical systems, Proc. Natl. Acad. Sci. USA 113, 3932 (2016).
- S. K. Goharoodi, K. Dekemele, L. Dupre, M. Loccufier, and G. Crevecoeur, Sparse identification of nonlinear duffing oscillator from measurement data, IFAC-PapersOnLine 51, 162 (2018).
- T. Ryu and S. Baek, Development of data-driven modeling method for nonlinear coupling components, Sci. Rep. 14, 14841 (2024).
- A. J. Majda and Y. Yuan, Fundamental limitations of ad hoc linear and quadratic multi-level regression models for physical systems, Discrete Contin. Dyn. Syst. B 17, 1333 (2012).
- C. Martinez-Villalobos, B. Dewitte, R. D. Garreaud, and L. Loyola, Extreme coastal El Niño events are tightly linked to the development of the Pacific Meridional Modes, npj Clim. Atmos. Sci. 7, 123 (2024).
- F.-F. Jin and S.-I. An, Thermocline and zonal advective feedbacks within the equatorial ocean recharge oscillator model for ENSO, Geophys. Res. Lett. 26, 2989 (1999).
- F.-F. Jin, H.-C. Chen, S. Zhao, M. Hayashi, C. Karamperidou, M. F. Stuecker, R. Xie, and L. Geng, Simple ENSO models, El Niño Southern Oscillation in a Changing Climate (Wiley-American Geophysical Union, Hoboken, NJ, 2020), Chap. 6, pp. 119–151.
- C. S. Meinen and M. J. McPhaden, Observations of warm water volume changes in the equatorial Pacific and their relationship to El Niño and La Niña, J. Clim. 13, 3551 (2000).
- C. Wen, A. Kumar, Y. Xue, and M. J. McPhaden, Changes in tropical Pacific thermocline depth and their relationship to ENSO after 1999, J. Clim. 27, 7230 (2014).
- G. Burgers, F.-F. Jin, and G. J. van Oldenborgh, The simplest ENSO recharge oscillator, Geophys. Res. Lett. 32, 2005GL022951 (2005).
- F.-F. Jin, L. Lin, A. Timmermann, and J. Zhao, Ensemble-mean dynamics of the ENSO recharge oscillator under state-dependent stochastic forcing, Geophys. Res. Lett. 34, L03807 (2007).
- Copernicus Climate Change Service, ORAS5 global ocean reanalysis monthly data from 1958 to present, Copernicus Climate Change Service (C3S) Climate Data Store (CDS), 10.24381/cds.67e8eeb7.
- S. Kido, I. Richter, T. Tozuka, and P. Chang, Understanding the interplay between ENSO and related tropical SST variability using linear inverse models, Clim. Dyn. 61, 1029 (2023).
- M. Newman, S.-I. Shin, and M. A. Alexander, Natural variation in ENSO flavors, Geophys. Res. Lett. 38, L14705 (2011).
- A. Capotondi, P. D. Sardeshmukh, and L. Ricciardulli, The nature of the stochastic wind forcing of ENSO, J. Clim. 31, 8081 (2018).
- Y. Peng, W. Duan, and J. Xiang, Effect of stochastic MJO forcing on ENSO predictability, Adv. Atmos. Sci. 28, 1279 (2011).
- K.-Y. Choi, G. A. Vecchi, and A. T. Wittenberg, ENSO transition, duration, and amplitude asymmetries: Role of the nonlinear wind stress coupling in a conceptual model, J. Clim. 26, 9462 (2013).
- T. Geng, W. Cai, and L. Wu, Two types of ENSO varying in tandem facilitated by nonlinear atmospheric convection, Geophys. Res. Lett. 47, e2020GL088784 (2020).
- I.-S. Kang and J.-S. Kug, El Niño and La Niña sea surface temperature anomalies: Asymmetry characteristics associated with their wind stress anomalies, J. Geophys. Res.: Atmos. 107, ACL 1 (2002).
- N. Kolbe, Wasserstein distance, https://github.com/nklb/wasserstein-distance.
- D. J. Vimont, M. Newman, D. S. Battisti, and S.-I. Shin, The role of seasonality and the ENSO mode in Central and East Pacific ENSO growth and evolution, J. Clim. 35, 3195 (2022).
- C. Penland and P. D. Sardeshmukh, The optimal growth of tropical sea surface temperature anomalies, J. Clim. 8, 1999 (1995).
- C. Penland, The Nyquist issue in linear inverse modeling, Mon. Weather Rev. 147, 1341 (2019).
- P. Jung and H. Risken, Motion in a double-well potential with additive colored Gaussian noise, Z. Phys. B 61, 367 (1985).
- H. Risken, The Fokker-Planck Equation: Equation: Methods of Solution and Applications, Springer Series in Synergetics, 2nd ed., Vol. 18, (Springer, Berlin, 1989), pp. xiv + 472.