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Solving the electronic structure problem for over 100 000 atoms in real space

Mehmet Dogan1, Kai-Hsin Liou2, and James R. Chelikowsky1,2,3

  • 1Center for Computational Materials, Oden Institute for Computational Engineering and Sciences, University of Texas at Austin, Austin, Texas 78712, USA
  • 2McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, USA
  • 3Department of Physics, University of Texas at Austin, Austin, Texas 78712, USA

Phys. Rev. Materials 7, L063001 – Published 20 June, 2023

DOI: https://doi.org/10.1103/PhysRevMaterials.7.L063001

Abstract

Using a real-space high-order finite-difference approach, we investigate the electronic structure of large spherical silicon nanoclusters. Within Kohn-Sham density functional theory and using pseudopotentials, we report the self-consistent field convergence of a system with over 100 000 atoms: a Si107,641H9,084 nanocluster with a diameter of 16 nm. Our approach uses Chebyshev-filtered subspace iteration to speed up the convergence of the eigenspace, and blockwise Hilbert space-filling curves to speed up sparse matrix-vector multiplications, all of which are implemented in the parsec code. For the largest system, we utilized 2048 nodes (114 688 cores) on the Frontera machine in the Texas Advanced Computing Center. Our quantitative analysis of the electronic structure shows how it gradually approaches its bulk counterpart as a function of nanocluster size. The band gap is enlarged due to quantum confinement in nanoclusters, but decreases as the system size increases, as expected. Our work serves as a proof of concept for the capacity of the real-space approach in efficiently parallelizing very large calculations using high-performance computer platforms, which can straightforwardly be replicated in other systems with more than 105 atoms.

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