Reuse & Permissions

It is not necessary to obtain permission to reuse this article or its components as it is available under the terms of the Creative Commons Attribution 4.0 International license. This license permits unrestricted use, distribution, and reproduction in any medium, provided attribution to the author(s) and the published article's title, journal citation, and DOI are maintained. Please note that some figures may have been included with permission from other third parties. It is your responsibility to obtain the proper permission from the rights holder directly for these figures.

Export citation

Export citation

Choose format for download:

Download Citation
  • Open Access

Anisotropic Subdiffusion in the Cytoplasm of Living Cells

Aranyak Sarkar1,2, Pooja Yadav1, and Matthias Weiss1,*

  • *Contact author: matthias.weiss@uni-bayreuth.de

Phys. Rev. Lett. 137, 138402 – Published 24 September, 2026

DOI: https://doi.org/10.1103/19kq-mf8c

Abstract

The cytoplasm of eukaryotic cells is a complex fluid that harbors a variety of membrane-enveloped organelles with distinct spatial distributions and duties. Peroxisomes, for example, are vesicular entities with radii in the sub-micron range, dispersed all over the cytoplasm to provide oxidative reaction vessels across the cell. Here, we have tracked peroxisomes as biologically relevant tracer particles to explore the local structure of the cytoplasm. Focusing on the vast majority of (sub)diffusively moving peroxisomes, we show that these display a significant motion anisotropy even in the absence of intact actin filaments and microtubules or when the endoplasmic reticulum (ER) is disrupted. In untreated cells, the local preference direction aligns with a global axis that correlates with the cell’s long axis; disrupting the cytoskeleton or the ER progressively randomizes this alignment. Altogether, our data indicate that the cytoplasm features a weak nematic substructure rather than being an isotropic fluid.

View figure in article

Physics Subject Headings (PhySH)

Article Text

Supplemental Material

References (22)

  1. B. Alberts, Molecular Biology of the Cell, 6th ed. (Garland Science, Taylor and Francis Group, New York, NY, 2015).
  2. A. Neuhaus, C. Eggeling, R. Erdmann, and W. Schliebs, Biochim. Biophys. Acta 1863, 1019 (2016).
  3. C.-M. Svensson, K. Reglinski, W. Schliebs, R. Erdmann, C. Eggeling, and M. Figge, Sci. Rep. 13, 19694 (2023).
  4. See Supplemental Material http://link.aps.org/supplemental/10.1103/19kq-mf8c, which includes supplementary text, tables, figures, videos, and Ref. [5].
  5. K. Speckner, F. Rehfeldt, and M. Weiss, Phys. Rev. E 110, 014406 (2024).
  6. M. Weiss, M. Elsner, F. Kartberg, and T. Nilsson, Biophys. J. 87, 3518 (2004).
  7. F. Etoc, E. Balloul, C. Vicario, D. Normanno, D. Lisse, A. Sittner, J. Piehler, M. Dahan, and M. Coppey, Nat. Mater. 17, 740 (2018).
  8. A. Sabri, X. Xu, D. Krapf, and M. Weiss, Phys. Rev. Lett. 125, 058101 (2020).
  9. R. Hua, D. Cheng, E. Coyaud, S. Freeman, E. Di Pietro, Y. Wang, A. Vissa, C. Yip, G. Fairn, N. Braverman, J. Brumell, W. Trimble, B. Raught, and P. Kim, J. Cell Biol. 216, 367 (2017).
  10. Y. Huo, W. Sun, T. Shi, S. Gao, and M. Zhuang, Commun. Biol. 5, 423 (2022).
  11. F. Rehfeldt and M. Weiss, Soft Matter 19, 5206 (2023).
  12. R. Metzler and M. Weiss, Phys. Chem. Chem. Phys. 27, 14350 (2025).
  13. A. Efremov, A. Radhakrishnan, D. Tsao, C. Bookwalter, K. Trybus, and M. Diehl, Proc. Natl. Acad. Sci. U.S.A. 111, E334 (2014).
  14. S. Gupta, Y. Li, and M. Guo, Soft Matter 15, 190 (2019).
  15. Y. W. Hui and M. M. Labes, J. Phys. Chem. 90, 4064 (1986).
  16. C. Zamora-Ledezma, C. Blanc, M. Maugey, C. Zakri, P. Poulin, and E. Anglaret, Nano Lett. 8, 4103 (2008).
  17. A. Zemel, F. Rehfeldt, A. Brown, D. Discher, and S. Safran, Nat. Phys. 6, 468 (2010).
  18. I. Fujiwara, M. Zweifel, N. Courtemanche, and T. Pollard, Curr. Biol. 28, 3183 (2018).
  19. K. Hirschberg, C. Miller, J. Ellenberg, J. Presley, E. Siggia, R. Phair, and J. Lippincott-Schwartz, J. Cell Biol. 143, 1485 (1998).
  20. L. Stadler and M. Weiss, New J. Phys. 19, 113048 (2017).
  21. M. Axelsson and G. Warren, Mol. Biol. Cell 15, 1843 (2004).
  22. N. Pawar, C. Donth, and M. Weiss, Curr. Biol. 24, 1905 (2014).

Outline

Information

Sign In to Your Journals Account

Filter

Filter

Article Lookup

Enter a citation